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Research: Publications

Below is a list of publications arising from the SYSFLO project:

Immink R.G.H., Posé D., Ferrario S., Ott F., Kaufmann K., Leal-Valentim F., de Folter S., van der Wal F., van Dijk A. D.J., Schmid M., Angenent G. C. (2012) Characterisation of SOC1's central role in flowering by the identification of its upstream and downstream regulators. Plant Phys 160: 433-449. more

Kaufmann K, Pajoro A, Angenent GC (Dec 2010) Regulation of transcription in plants: mechanisms controlling developmental switches. Nature Reviews Genetics 11, 830–842. doi:10.1038/nrg2885. more

Leal Valentim F, Neven F, Boyen P, van Dijk ADJ (2012) Interactome-Wide Prediction of Protein-Protein Binding Sites Reveals Effects of Protein Sequence Variation in Arabidopsis thaliana. PLoS ONE 7 (10): e47022. doi:10.1371/journal.pone.0047022 more

Madrigal P, Krajewski P (2012) Current bioinformatic approaches to identify DNase I hypersensitive sites and genomic footprints from DNase-seq data. Front Genet. 2012;3:230. doi: 10.3389/fgene.2012.00230. Epub 2012 Oct 31. more

Madrigal P (2012) Flowering and plant development at the 38th Spanish Society of Genetics Congress, Murcia, 2011. J Plant Growth Regul. 31(1), 136-138. doi:10.1007/s00344-011-9241-9. more

Madrigal P, Sela N , Lin SM (2011) PLoS Computational Biology Conference Postcards from ISMB/ECCB 2011. PLoS Comput Biol 7 (11): e1002259. doi:10.1371/journal.pcbi.1002259. more

Mizzotti C, Mendes MA, Caporali E, Schnittger A, Kater MM, Battaglia R, Colombo L (2011) The MADS-box genes SEEDSTICK and ARABIDOPSIS BSISTER play a maternal role in fertilization and seed development. The Plant Journal doi: 10.1111/j.1365-313X.2011.04878.x more

Parcy F, Lohmann JU. (2011) June bloom in Maratea. Development 138, 4335-4340. doi: 10.1242/dev.067215. more

Porri A, Torti S, Romera Branchat M, Coupland G (2012) Spatially distinct regulatory roles for gibberellins in the promotion of flowering of Arabidopsis under long photoperiods. Development doi: 10.1242/dev.077164 more

Schiessl, K., Kausika, S., Southam, P., Bush, M., Sablowski, R. (2012) JAGGED controls growth anisotropy and coordination between cell size and cell cycle during plant organogenesis. Current Biology 22 (19) 1739-1746. more

Smaczniak, C., Immink G.H.R., Muiño J.M., Blanvillain R., Busscher M., Busscher-Lange J., Dinh Q. D., Liu S. , Westphal A.H., Boeren S., Parcy F., Xu L., Carles C.C., Angenent G.C., Kaufmann K. (2012). Characterization of MADS-domain transcription factor complexes in Arabidopsis flower development. Proc. Natl. Acad. Sci. USA 109 (5) 1560-1565. more

Smaczniak, C., Li N., Boeren S., America T., van Dongen W., Goerdayal S.S, de Vries S., Angenent G.C., Kaufmann K. 2012. Proteomics-based identification of low-abundance signaling and regulatory protein complexes in native plant tissues. Nature protocols 7 (12): 2144-2158. doi:10.1038/nprot.2012.129. more

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